Papers 2011

Baumgartner C, Osl M, Netzer M, and Baumgartner D. Bioinformatic-driven search for metabolic biomarkers in disease. Journal of Clinical Bioinformatics 1(1):2, 2011 (0.000)

Bennett KL, Funk M, Tschernutter M, Breitwieser FP, Planyavsky M, Ubaida-Mohien C et al. Proteomic analysis of human cataract aqueous humour: Comparison of one-dimensional gel LCMS with two-dimensional LCMS of unlabelled and iTRAQ(R)-labelled specimens. J Proteomics 74(2):151-166, 2011 (3.851)

Burkard TR, Planyavsky M, Kaupe I, Breitwieser FP, Bürkstürmmer T, Bennett KL et al. Initial characterization of the human central proteome. BMC Systems Biology 5(1):17, 2011 (4.064)

Hartler J, Trotzmuller M, Chitraju C, Spener F, Kofeler HC, and Thallinger GG. Lipid Data Analyzer: Unattended Identification and Quantitation of Lipids in LC-MS Data. Bioinformatics 27(4):572-577, 2011 (4.925)

Haura EB, Muller A, Breitwieser FP, Li J, Grebien F, Colinge J et al. Using iTRAQ combined with tandem affinity purification to enhance low-abundance proteins associated with somatically mutated EGFR core complexes in lung cancer. J Proteome Res 10(1):182-190, 2011 (5.132)

He Q, Bardet A, Patton B, Purvis J, Johnston J, Paulson A, Gogol M, Stark A, and Zeitlinger J. High conservation of transcription factor binding and evidence for combinatorial regulation across six Drosophila species. Nature Genetics. 43(5):414-420, 2011 (34.284)

Lakota K, Thallinger GG, Cucnik S, Bozic B, Mrak-Poljsak K, Ambrozic A et al. Could antibodies against Serum Amyloid A function as physiological regulators in humans? Autoimmunity 44(2):149-158, 2011 (2.813)

Mlecnik B, Tosolini M, Kirilovsky A, Berger A, Bindea G, Meatchi T, Bruneval P, Trajanoski Z, Fridman W-H, Pages F, Galon J. Histopathological-based prognostic factors of colorectal cancers are associated with the state of the local immune reaction. J Clin Oncol. 29(6):610-618, 2011 (17.793)

Mueller LA, Kugler KG, Dander A, Graber A, and Dehmer M. QuACN: an R package for analyzing complex biological networks quantitatively. Bioinformatics 27(1):140-141, 2011 (4.925)

Pabinger S, Rader R, Agren R, Nielsen J, Trajanoski Z. MEMOSys: Bioinformatics platform for genome-scale metabolic models BMC Syst Biol. 5:20, 2011 (4.064)

Prokesch A, Bogner-Strauss JG, Hackl H, Rieder D, Neuhold C, Walenta E, Krogsdam A, Scheideler M, Papak C, Wong WC, Vinson C, Eisenhaber F, Trajanoski Z. Arxes: Retrotransposed genes required for adipogenesis Nucl Acids Res. 39(8):3224-3239, 2011 (7.479)

Seemann SE, Richter AS, Gesell T, Backofen R, and Gorodkin J. Structural conserved RNA interactions predicted by PETcofold. Bioinformatics 27(2):211-219, 2011 (4.926)